Running in Cusco: The Complete Guide to Trail Running, Altitude & Routes

Introduction

Running in Cusco is unlike anywhere else in the world.

At 3,400 meters (11,150 ft) above sea level, every run becomes a challenge—but also an unforgettable experience. Whether you’re an experienced runner looking to train at altitude or a traveler wanting a scenic jog, Cusco offers a unique combination of:

• High-altitude performance benefits

• Ancient Incan trails

• Quiet mountain landscapes

• Deep cultural experiences

This guide will show you everything you need to know—from where to run, how to adapt, and the best experiences to make the most of it.

Running at Altitude (What You Need to Know)

Altitude is the biggest factor when running in Cusco.

At 3,400m:

• Oxygen levels are significantly lower

• Your heart rate will be higher

• Pace will feel slower—even for experienced runners

Key tips:

Slow down: Expect to run 20–50% slower
Hydrate more than usual
Give yourself 2–3 days to adapt
Keep early runs short and easy
If you push it to hard you are likely to start getting numb fingers as blood/oxygen is prioritised to the organs and muscles in use.

👉 If you’ve just arrived, focus on easy Zone 2 runs only

When Is the Best Time to Run in Cusco?

Early mornings are always best for:

Weather - Our cold season is between June - August and mornings can be chilly during those months.
UV Protection - Our UV rating in the day is usually between Very high & Extreme.
Light - It gets dark consistently around 6pm all year round so be aware if you head out for a late afternoon run.
Trail conditions - In the rainy season it generally rains later in the day
Safety - In the morning more local sport enthusiasts are out, later afternoon the trails can be deserted.

Where to run in Cusco

There are three realistic options to run when you visit Cusco.

Trails - These are obviously the most enjoyable, scenic and exciting to run. There are a few local routes available. (See below)

Track - There is a running track at the IPD sport complex. It is roughly a 7-8 soles taxi ride from the main square. It costs 2 soles to enter and is open 6am - 6pm with the last entry being 4:30pm. N.B. On Tuesdays, Thursdays & Saturdays it is closed for the general public until 9:30am to allow the elite athletes to train. It is also worth noting that at times there are school competitions and during these it is closed to the general public.

Via Express - Next to the airport there is a new cycle path that runs the whole length of the runway. Many locals will run here in the early morning or evening as it is away from traffic and is relatively safe. During the day it isn't recommended by us as it is running next to an industrial estate with a main road giving off pollution.

Streets - Running in many cities allows you to explore a new place in a unique way and get an idea for life for the locals. Unfortunately Cusco isn't really one of those cities. The city wasn't designed for runners and you will be fighting traffic, constantly watching out for holes in the pavements, breathing in pollution and not having an enjoyable run. If it is your only option then it is best very early to beat the pollution or late at night.

Run by yourself or a guided trail?

Every runner is different. Some love the freedom of exploring new routes on their own, while others prefer the experience of running with a guide, a group, or simply having that extra layer of support.

At Run the Andes, we understand both styles. That’s why we’ve created this guide — to give you the confidence and knowledge to explore independently, while also offering the option of professionally guided trail runs for those who want a deeper, safer, and more connected experience.

Below are some of the key benefits of joining one of our guided runs:

Safety First

Trail running in Cusco is incredible — but it comes with real risks. Many routes include narrow paths, steep drop-offs, and remote terrain.

If you’re unfamiliar with the trails, a small mistake can quickly turn into a serious situation. Unfortunately, every year in the Cusco region there are cases of hikers getting lost or into difficulty when exploring alone.

With Run the Andes, you’re never on your own. Our guides know the terrain inside out, and we always carry a satellite communication device — ensuring help is always within reach if needed.

Access Hidden Routes

Some of the best trails in Cusco aren’t easy to find — or reach.

Many of our routes are far from the typical tourist paths and require complex logistics, multiple transport connections, or local knowledge to access. In some cases, they’re simply not realistic to do alone.

Running with us opens the door to these hidden landscapes — from remote Andean valleys to high mountain passes that most visitors never experience.

Support Local Runners

Run the Andes is more than just a trail running company — it’s a platform to support local talent.

We work closely with elite runners from the region, helping them pursue their goals while sharing their knowledge, culture, and passion for the mountains with you.

By joining a guided run, you’re directly contributing to their journey — and becoming part of something bigger than just a run.

Best Solo Trails in Cusco

Inkilltambo – Temple of the Moon Loop (8km)

If you’re looking for the perfect introduction to trail running in Cusco, this is it.

The Inkilltambo – Temple of the Moon loop is one of the most accessible and rewarding routes you can do on your own. It combines history, flowing trails, and beautiful scenery — all within easy reach of the city.

You can start directly from the Plaza de Armas, making it ideal if you want a run straight from your accommodation. From the centre, it’s roughly a 3km uphill run to reach the start of the trail.

Once on the trail, you’ll follow a clear and well-used path towards Inkilltambo, keeping the ruins on your right-hand side. The route takes you through peaceful countryside and into a stunning eucalyptus forest, where the atmosphere becomes quieter and more remote.

You’ll cross a small river via a wooden bridge and continue through the trees until you reach a wider trail junction. Here, take a sharp left (do not cross the bridge) and follow the path back toward the Temple of the Moon.

From there, the trail descends smoothly back down into San Blas.

Sacred Valley

If you find yourself in the Sacred Valley then you are in luck. Cross the river and you have an unpaved road that runs the length of the valley. Here you can run through farmland and get a glimpse of the real Andean life for many farmers.

Temple of the Moon

If you are short on time then hike up to the Temple of the Moon and you can explore the countryside surrounding it. There are plenty of different trails to take and explore and you can make a nice run with great views across the city.

Best guided trails around Cusco

The Incan Ruins Of Cusco – 9KM Inca Trail Adventure

A great introduction to trail running just minutes from the city — and a route that even many local runners don’t know.

This gentle 9km run takes you into the hills above Cusco, following quiet trails through open countryside and past a series of lesser-known Incan ruins. The terrain is smooth and highly runnable, with a mix of flat and gradual downhill sections that make it accessible to most runners.

Along the way, you’ll enjoy wide panoramic views over Cusco before descending back toward the city, finishing in the lively San Blas neighbourhood — the perfect place to grab a fresh juice and relax post-run.

Trail Run & Huatia: Running Through Inca Roots

This experience blends trail running with living Andean culture.

Starting just above Tambomachay, you’ll follow flowing trails through traditional chacras (farmland), rolling hills, and eucalyptus groves. The terrain is gentle and highly runnable, making it a perfect introduction to guided trail running in Cusco.

After around 5km, you arrive in the community of Pucará, where the experience shifts. Here, you’ll take part in preparing a huatia — a traditional earthen oven used in the Andes for generations. You’ll help build it, cook in it, and share freshly prepared food with the community.

From there, the run continues along ancient paths, finishing with a beautiful descent into San Blas.

Lares Run + Hot Springs Finish 17km

If you’re looking for something unforgettable, this is it.

The day begins with an early transfer from Cusco or the Sacred Valley to the Lares trailhead. From there, you’ll hike through a spectacular high-mountain landscape, gradually climbing toward a pass at around 4,300m. Before some of the best trails lead you down into the Cuncani valley and into Lares.

Expect alpine lakes, roaming llamas, and remote Andean communities far from the usual routes.

For more route please check out our full list here

Frequently Asked Questions

Is it safe to run in Cusco?

Generally Yes — but like any mountain environment, it depends on where you go. Routes close to the city such as San Blas and the hills above Cusco are generally safe and well-used, we would recommend to go in the mornings. Always be aware of your surroundings, especially when up by the Temple of the Moon. You must also be aware of more remote trails can include steep drop-offs, unclear paths, and often no phone signal. Always inform someone of the route that you are taking and your expected time back. For longer trails ensure you take the correct provisions and remember the weather can change instantly.

How does the altitude affect running in Cusco?

Cusco sits at around 3,400 meters (11,150 ft), and you will feel it.

Expect your pace to slow significantly, especially in the first few days. Even easy runs can feel challenging, and recovery takes longer. It’s important to start gently, stay hydrated, and allow your body time to adapt. Remember you should enjoy the experience of running in incredible scenery rather than pace.

How many days should I acclimatise before running?

Ideally, give yourself 2–3 days before lacing up your trainers.

You can still move during this time — light walks or very easy jogs are fine — but avoid intense sessions until your body has adjusted to the altitude.

Can beginners go trail running in Cusco?

Yes. There are routes suitable for all levels.

Shorter, more runnable trails like the Inkilltambo or San Blas routes are perfect for beginners. For more remote or technical routes, going with a guide is highly recommended.

Do I need a guide to run in Cusco?

No, There are several trails you can safely explore on your own. However, a guide becomes extremely valuable if you want to:

Access more remote routes
Navigate complex trail networks
Run safely at higher altitudes or in unfamiliar terrain

What is the best time of year to run in Cusco?

You can run year-round, but conditions vary:

Dry season (May–September): Best for trail running — clear skies, dry trails
Wet season (November–March): Greener landscapes but muddier trails and possible rain

April and October are great shoulder months with fewer crowds.

What should I bring for a trail run in Cusco?

Conditions can change quickly, especially in the mountains. Essentials include:

Water or hydration pack
Lightweight waterproof jacket
Sun protection (hat, sunscreen, sunglasses)
Snacks or energy gels
Trail running shoes with good grip

For longer or remote runs, consider extra layers and navigation support.

Are there water sources on the trails?

On most routes, yes — but they are not safe to drink untreated.

It’s best to carry your own water or use purification methods if you plan to refill along the way.

Can I run to Machu Picchu?

Technically yes — but it requires planning.

Routes like the Inca Trail or alternative treks (e.g. Salkantay or Lares region) are best done as a guided experiences due to permits, logistics, and distance.

What makes trail running in Cusco unique?

It’s the combination of altitude, history, and culture.

You’re not just running in the mountains — you’re following ancient Incan paths, passing through traditional communities, and experiencing landscapes that feel completely untouched.